Structural Genomics Consortium

Start : March 2016 | Status : Active

The scientist: Dr. Cynthia Tallant is a Postdoctoral Researcher in the Chemical Biology Unit at the Structural Genomics Consortium (SGC), working under the supervision of Dr. Kilian Huber and Dr. Raymond Hui. She has a PhD in Structural Biology and Enzyme Kinetics and several years of experience as a PostDoc in these areas.

The sponsors: The Structural Genomics Consortium, Structural and Chemical Parasitology lab (Oxford and Toronto).

Foundation funding:  The Foundation is providing £160,915 in support, including co-funding from the European Union through its FP7 COFUND programme.

GSK’s contribution: GSK is providing scientific expertise in screening, enzymology, medicinal chemistry, in vitro parasite culture as well as access to Biosafety Level 3 facilities and to GSK´s collection of proprietary compounds.

Project Description: The focus of the project will be the exploration of new antimalarial targets involved in parasite transcriptional regulation, such as the histone methyltransferase (HMT) SET1, and protein biosynthesis pathways controlled by the ribosomal translation elongation factor 2 (eEF2).

A number of histone methyltransferase inhibitors have been shown to inhibit parasite growth in the intraerythrocytic cycle in both P. falciparum and P. vivax ex vivo experiments. Concomitantly, these same compounds were shown to reduce H3K4me3 methylation levels in parasites.  Additional genetic studies in P. falciparum showed that some of these genes are essential for the parasite in the asexual blood stage.
Recently, a novel antimalarial compound DDD107498 has been discovered and publicly discosed. This compound has excellent drug-like properties and exhibits a potent activity profile against multiple life-cycle stages of the parasite. Its molecular target has been identified as the translation elongation factor 2 (eEF2) using whole genome sequencing of resistant cell lines treated with DDD107498. This finding nominates PfEF2 as a novel antimalarial target.
Together, the proposal aims to identify chemically diverse compounds targeting these two classes of enzymes, with activity against resistant mutants and inert to the human orthologues.